Suranaree

E-mail
ep9157@gmail.com

Assignment 1

Haemophilus influenzae (H. influenzae) type B (Hib)
Neisseria meningitides (N. meningitides)
Streptococcus pneumoniae (S. pneumonia)
Listeria monocytogenes (L. monocytogenes
Group B Streptococcus


Assignment 2
Use file "All-H for phylo.txt" from folder "Sequence_Tools\EX_Influenza" to do the Protein identity and similarity matrix.


Assignment3
https://drive.google.com/file/d/1XHLurydsp5u9ncvxSFEXmsOexaxuZTxs/view?usp=sharing

Please select 2 sequences from the link above to make the BLASTN and BLASTP


Primer
TGTAAACAGGATCACATATGGGGCATGTC



 Primer พี่หมี
F
CCCGGATCCGAAAGGGGAGGAGAATCATGAAAC

R
CGGTTTCAATTTATGTTCAAAGATAGGGATCCGGG


>Consensus-55
GGTAAAAGTANTAGAAGANAAGGCTTTNAGCCCAGAAGTAATACCCATGTTTTCAGCATTATCAGAAGGAGCCACCCCACAAGATTTAAANACCATGCTAAACACAGTGGGGGGACATCAAGCAGCNATGCAAATGTTAAAAGATACCATCAATGAGGAAGCTGCAGAATGGGANAGGNTACATCCAGTNCATGCAGGGCCTAT


Assignment 4 !!!!
Please select one of sequence from the link,

https://drive.google.com/file/d/1XHLurydsp5u9ncvxSFEXmsOexaxuZTxs/view?usp=sharing

then make the phylogenetic tree using at least 5 different sequences (should be the same gene) as the reference and add your selected sequence on the phylogenetic tree.

Deadline for assignment is  midnight 22/09/2019